Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906401.1_cds_XP_016456576.1_50397
CDS Infomation

[gene=LOC107780535] [db_xref=GeneID:107780535] [protein=APO protein 2, chloroplastic-like] [protein_id=XP_016456576.1] [location=join(42650..42784,44420..44766,45216..46044)] [gbkey=CDS]
Sequence

ATGGATTGTGGCTGTCTACACTCCCAACTCAGTACCACAGTTTTAGTACATAGCAAAGGG
AGAATTCAACCCCCTAAAGTCAGAATTTTGAGATGCAATCCCCAGTATAATCTAAGTTCA
CTTGATTCTTTGCAGCAAAGTTGCAGTGGGGTGGCAATTCAATTGAAGTTTAGAGGTCCA
TCAGAGAAGTTACGTCCTGTCCGAGCCGCTGTTATCAGATGCGATCATCCGCAAAATGCA
GATTTGCCTCGTTACTATTCAAGGAAGGAGAAGAAGCCCTTTCCAATACCTATTGTGGAG
CTACGAAGAGCTGCGAGGGAGAGAATGAAAAATCGACTACCTAAAAGACGTGTGCCTCCA
CCAAAAATCGGATTGGTCATCAAAAGCCTACTTCCTCTCGCGTACAATGTGTTTAACGCA
CGGATAACAGTGATTAACAATCTCAAGCGGCTCTTGAAAGTGGTACCTGTTAATGGTTGC
AAGTGGTGTAACGAAATCCATGTGGGACCTGTTGGGCATCCTTTCAAGTCATGTAGAGGA
TCACAAGCTTCAAAACGCAAAGGACATCATGAGTGGGGAAAGGCAGTTCTTGAAGACATA
ATGGTGCCACTTGAATCCTACCATTTATATGATCGCCTAGGGAAACGAATTTCACATGAG
GAGAGATTTTCTATCCCTCGAATCCCTGCAGTAGTGGAGCTTTGTATCCAAGCAGGTGTT
GATATACCCGAATATCCTACCAAGAGGAGAAGAAAACCAATAATATGGACCGGAAAAAAT
GAATTCGTTGATGCAGATGAAAGTGAATTACCTGATCCCGAACCAGAATCTCCAAAGCCT
CCAATTTTAACCGAGATACCCGATGTAGATGTAGAACCACCGTCGAGTGCAGAAGAAACG
GTGTTGCTCGCTGAAGAAACACTCGAAGCGTGGGAAAGAATGAGAGTAGGAGCGAATAGG
CTGATGAAGATGTATCCGGTGAGAGTTTGCGGGTACTGTCCGGAGGTGCATGTTGGTCCA
AGCGGACACAAAGCACAAAACTGTGGAGCTCATAAGCACCAACAACGAAACGGGCAACAC
GGTTGGCAGACAGCAGTGCTAGATGACTTAATACCACCAAGATATGTGTGGCACGTTCCC
GATGTAACTCAATCGTTGCAACGAGAGCTTCGGAGCTTCTATGGGCAAGCTCCTGCAGTG
GTGGAAATATGTGTACAGGCTGGTGCTGAAGTCCCGGAGCAATACAAGCCAACTATGAGG
TTTGATGTGGGGATTCCTAGCAGTATCAAAGAAGCAGAAATGGTTGTTTAG

Peptide Sequence

PEP ID

XP_016456576.1
PEP Infomation

PREDICTED: APO protein 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MDCGCLHSQLSTTVLVHSKGRIQPPKVRILRCNPQYNLSSLDSLQQSCSGVAIQLKFRGP
SEKLRPVRAAVIRCDHPQNADLPRYYSRKEKKPFPIPIVELRRAARERMKNRLPKRRVPP
PKIGLVIKSLLPLAYNVFNARITVINNLKRLLKVVPVNGCKWCNEIHVGPVGHPFKSCRG
SQASKRKGHHEWGKAVLEDIMVPLESYHLYDRLGKRISHEERFSIPRIPAVVELCIQAGV
DIPEYPTKRRRKPIIWTGKNEFVDADESELPDPEPESPKPPILTEIPDVDVEPPSSAEET
VLLAEETLEAWERMRVGANRLMKMYPVRVCGYCPEVHVGPSGHKAQNCGAHKHQQRNGQH
GWQTAVLDDLIPPRYVWHVPDVTQSLQRELRSFYGQAPAVVEICVQAGAEVPEQYKPTMR
FDVGIPSSIKEAEMVV

Transcript Sequence

Gene sequence data has not been registered.